= PubMed, 
= Journal, 
= Local PDF file| Author(s) | Title | Journal | Year | Volume | Pages | 5-Year Impact Factor (JCR Edition 2014) | Links | Comments |
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| Ripa R, Dolfi L, Terrigno M, Pandolfini L, Savino A, Arcucci V, Groth M, Terzibasi Tozzini E, Baumgart M, Cellerino A. |
MicroRNA miR-29 controls a compensatory response to limit neuronal iron accumulation during adult life and aging. |
BMC Biol. | 15(1) | 9 |
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| Baumgart M, Priebe S, Groth M, Hartmann N, Menzel U, Pandolfini L, Koch P, Felder M, Ristow M, Englert C, Guthke R, Platzer M, Cellerino A. | Longitudinal transcriptional analysis of vertebrate aging identifies mitochondrial complex I as a small molecule-sensitive modifier of lifespan. | Cell Syst. | 2(2) | 122-132 |
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| Gebauer J, Gentsch C, Mansfeld J, Schmeißer K, Waschina S, Brandes S, Klimmasch L, Zamboni N, Zarse K, Schuster S, Ristow M, Schäuble S, Kaleta C. | Genome-scale database and reconstruction of Caenorhabditis elegans metabolism. | Cell Syst. | S2405-4712(16)30151-X | |
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| Marthandan S, Baumgart M, Priebe S, Groth M, Schaer J, Kaether C, Guthke R, Cellerino A, Platzer M, Diekmann S, Hemmerich P. | Conserved senescence associated genes and pathways in primary human fibroblasts detected by RNA-Seq. | PLoS One. | 11(5) | e0154531 | 3.234 | |
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| Marthandan S, Menzel U, Priebe S, Groth M, Guthke R, Platzer M, Hemmerich P, Kaether C, Diekmann S. |
Conserved genes and pathways in primary human fibroblast strains undergoing replicative and radiation induced senescence. |
Biol Res. | 49(1) | 34 | |
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| Reichwald K, Petzold A, Koch P, Downie BR, Hartmann N, Pietsch S, Baumgart M, Chalopin D, Felder M, Bens M, Sahm A, Szafranski K, Taudien S, Groth M, Arisi I, Weise A, Bhatt SS, Sharma V, Kraus JM, Schmid F, Priebe S, Liehr T, Görlach M, Than ME, Hiller M, Kestler HA, Volff JN, Schartl M, Cellerino A, Englert C, Platzer M. | Insights into sex chromosome evolution and aging from the genome of a short-lived fish. | Cell. | 163(6) | 1527-38 | 32.242 | |
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| Wendler S, Hartmann N, Hoppe B, Englert C. | Age-dependent decline in fin regenerative capacity in the short-lived fish Nothobranchius furzeri. | Aging Cell. | 14(5) | 857-66 | 6.340 | |
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| Brodoehl S, Klingner C, Stieglitz K, Witte OW. | The impact of eye closure on somatosensory perception in the elderly. | Behav Brain Res. | 293 | 89-95 | 3.028 | |
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| Brodoehl S, Klingner CM, Witte OW. | Eye closure enhances dark night perceptions. | Sci Rep. | 5 | 10515 | |
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| Imam S, Schäuble S, Brooks AN, Baliga NS, Price ND. | Data-driven integration of genome-scale regulatory and metabolic network models. | Front Microbiol. | 6 | 409 | 3.989 | |
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| Mansfeld J, Urban N, Priebe S, Groth M, Frahm C, Hartmann N, Gebauer J, Ravichandran M, Dommaschk A, Schmeisser S, Kuhlow D, Monajembashi S, Bremer-Streck S, Hemmerich P, Kiehntopf M, Zamboni N, Englert C, Guthke R, Kaleta C, Platzer M, Sühnel J, Witte OW, Zarse K, Ristow M. | Branched-chain amino acid catabolism is a conserved regulator of physiological ageing. | Nat Commun. | 6 | 10043 | 11.470 | |
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| Marthandan S, Priebe S, Baumgart M, Groth M, Cellerino A, Guthke R, Platzer P, Hemmerich P and Diekmann S. | Similarities in gene expression profiles during in vitro aging of primary human embryonic lung and foreskin fibroblasts. | Biomed Res Int. | Article ID 731937 | 17 pages | 1.579 | |||
| Marthandan S, Priebe S, Groth M, Guthke R, Platzer M, Hemmerich P, Diekmann S. | Hormetic effect of rotenone in primary human fibroblasts | Immun Ageing | 12 | 11 | |
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| Prell T, Hartung V, Tietz F, Penzlin S, Ilse B, Schweser F, Deistung A, Bokemeyer M, Reichenbach JR, Witte OW, Grosskreutz J. | Susceptibility-weighted imaging provides insight into white matter damage in amyotrophic lateral sclerosis. | PLoS One | 10(6) | e0131114 | 3.234 | |
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| Baumgart M, Groth M, Priebe S, Savino A, Testa G, Dix A, Ripa R, Spallotta F, Gaetano C, Ori M, Terzibasi Tozzini E, Guthke R, Platzer M, Cellerino A. | RNA-seq of the aging brain in the short-lived fish N. furzeri - conserved pathways and novel genes associated with neurogenesis. | Aging Cell. | 13(6) | 965-74 | 6.340 | |
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| Boehme M, Guenther M, Stahr A, Liebmann M. Jaenisch N, Witte OW, Frahm C. | Impact of indomethacin on neuroinflammation and hippocampal neurogenesis in aged mice. | Neurosci Lett. | 572 | 7-12 | 2.030 | |
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| Engelman C, Hahn U. | An empirically grounded approach to extend the linguistic coverage and lexical diversity of verbal probaqbilities. | In: CogSci 2014 - Proceedings of the 36th Annual Cognitive Science Conference. Cognitive Science Meets Artificial Intelligence: Human and Artificial Agents in Interactive Context. Quebec City, Quebeq, Canada, July 23-26, 2014. | 451-456 | |||||
| Franke K, Ristow M, Gaser C; Alzheimer‘s Disease Neuroimaging Initiative. | Gender-specific impact of personal health parameters on individual brain aging in cognitively unimpaired elderly subjects. | Front Aging Neurosci. | 6 | 94 | 4.000 |
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| Hahn U, Engelmann C. | Grounding epistemic modality in speaker‘s judgements. | PRICAI 2014 - Proceedings of the 13th Pacific Rim International Conference on Artificial Intelligence. Gold Coast, Australie, 1-5 Dec 2014. | 654-687 | |||||
| Huehne R, Thalheim T, Suehnel J. | AgeFactDB - The JenAge ageing factor database - Towards data integration in ageing research. | Nucleic Acids Res. | 42(1) | D892-6 | 9.112 | |
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| Jaenisch N, Popp A, Guenther M, Schnabel J, Witte OW, Frahm C. | Pro-apoptotic function of GABA-related transcripts following stroke. | Neurobiol Dis. | 70 | 237-44 | 3.652 | |
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| Marthandan S, Priebe S, Hemmerich P, Klement K, Diekmann S. | Long-term quiescent fibroblast cells transit into senescence. | PLoS One | 9(12) | e115597 | 3.234 | |
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| Marthandan S, Freeburn R, Steinbrecht S, Pawelec G, Barnett Y. | SENIEUR status of the originating cell donor negates certain ‘anti-immunosenescence‘ effects of ebselen and N-acetyl cysteine in human T cell clone cultures. | Immun Ageing | 11(1) | 17 | 3.538 | |
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| Münch S, Weidtkamp-Peters S, Klement K, Grigaravicius P, Monajembashi S, Salomoni P, Pandolfi PP, Weißhart K, Hemmerich P. | The tumor suppressor PML specifically accumulates at RPA/Rad51-containing DNA damage repair foci but is non-essential for DNA damage-induced fibroblast senescence. | Mol Cell Biol. | 34(10) | 1733-46 | 4.777 | |
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| Ristow M, Schmeisser K. | Mitohormesis: Promoting Health and Lifespan by Increased Levels of Reactive Oxygen Species (ROS). | Dose Response. | 12(2) | 288-341 | 1.217 | |
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| Schleicher J, Guthke R, Dahmen U, Dirsch O, Holzhuetter HG, Schuster S. | A theoretical study of lipid accumulation in the liver-implications for nonalcoholic fatty liver disease. | Biochim Biophys Acta (BBA) - Molecular and Cell Biology of Lipids | 1841(1) | 62-9 | 5.162 | |
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| Schuster S, Stark H. | What can we learn from Einstein and Arrhenius about the optimal flow of our blood? | Biochim Biophys Acta - General Subj. | 1840(1) | 271-6 | 4.381 | |
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| Segref A, Kevei É, Pokrzywa W, Schmeisser K, Mansfeld J, Livnat-Levanon N, Ensenauer R, Glickman MH, Ristow M, Hoppe T. | Pathogenesis of human mitochondrial diseases is modulated by reduced activity of the ubiquitin/proteasome system. | Cell Metab. | 19(4) | 642-52 | 17.565 | |
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| Sieber MW, Guenther M, Jaenisch N, Albrecht-Eckardt D, Kohl M, Witte OW, Frahm C. | Age-specific transcriptional response to stroke. | Neurobiol Aging | 35(7) | 1744-54 | 5.013 |
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| Weimer S, Priebs J, Kuhlow D, Groth M, Priebe S, Mansfeld J, Merry TL, Dubuis S, Laube S, Pfeiffer AF, Schulz TJ, Guthke R, Platzer M, Zamboni N, Zarse K, Ristow M | D-Glucosamine supplementation extends lifespan of nematodes and aging mice. | Nat Commun. | 5 | 3563 | 11.470 | |
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| Brandtstädt S, Schmeisser K, Zarse K, Ristow M. | Lipid-lowering fibrates extend C. elegans lifespan in a NHR-49/PPARalpha-dependent manner. | Aging (Albany NY). | 5(4) | 270-5 | 6.432 | |
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| Fuellen G, Boerries M, Busch H, de Grey AD, Hahn U, Hiller T, Hoeflich A, Jansen L, Janssens GE, Kaleta C, Meinema AC, Schäuble S, Schofield PN, Smith B, Sühnel J, Vera J, Wagner W, Wönne EC, Wuttke D, Simm A. | In silico approaches and the role of ontologies in aging research. | Rejuvenation Res. | 16(6) | 540-6 | 3.311 | |
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| Graf M, Hartmann N, Reichwald K, Englert C. | Absence of replicative senescence in cultured cells from the short-lived killifish Nothobranchius furzeri. | Exp Gerontol. | 48(1) | 17-28 | 3.485 | |
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| Petzold A, Reichwald K, Groth M, Taudien S, Hartmann N, Priebe S, Shagin D, Englert C and Platzer M. | The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. | BMC Genomics. | 14 | 185 | 3.986 | |
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| Priebe S, Menzel U, Zarse K, Groth M, Platzer M, Ristow M, Guthke R. | Extension of life span by impaired glucose metabolism in Caenorhabditis elegans is accompanied by structural rearrangements of the transcriptomic network. | PLoS One. | 8(10) | e77776 | 3.234 | |
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| Priebe S, Menzel U. | Assignment of orthologous genes by utilization of multiple databases: the orthology package in R. | In: International Conference on Bioinformatics Models, methods and Algorithms. Barcelona, Spain, 11-14 February, 2013. | 105-110 | |||||
| Schäuble S, Stavraum AK, Puntervoll P, Schuster S, Heiland I. | Effect of substrate competition in kinetic models of metabolic networks. | FEBS Lett. | 587(17) | 2818-2824 | 3.169 | |||
| Schmeisser K, Mansfeld J, Kuhlow D, Weimer S, Priebe S, Heiland I, Birringer M, Groth M, Segref A, Kanfi Y, Price NL, Schmeisser S, Schuster S, Pfeiffer AF, Guthke R, Platzer M, Hoppe T, Cohen HY, Zarse K, Sinclair DA, Ristow M. | Role of sirtuins in lifespan regulation is linked to methylation of nicotinamide. | Nat Chem Biol. | 9(11) | 693-700 | 12.996 | |
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| Schmeisser S, Priebe S, Groth M, Monajembashi S, Hemmerich P, Guthke R, Platzer M, Ristow M. | Neuronal ROS signaling rather than AMPK/sirtuin-mediated energy sensing links dietary restriction to lifespan extension. | Mol Metab. | 2(2) | 92-102 | |
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| Schmeisser S, Schmeisser K, Weimer S, Groth M, Priebe S, Fazius E, Kuhlow D, Pick D, Einax JM, Guthke R, Platzer M, Zarse K, Ristow M. | Mitochondrial hormesis links low-dose arsenite exposure to lifespan extension. | Aging Cell. | 12(3) | 508-17 | 6.340 | |
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| Sieber MW, Jaenisch N, Brehm M, Guenther M, Linnartz-Gerlach B, Neumann H, Witte OW, Frahm C. | Attenuated inflammatory response in triggering receptor expressed on myeloid cells 2 (TREM2) knock-out mice following stroke. | PLoS One. | 8(1) | e52982 | 3.234 | |
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| Stavrum AK, Heiland I, Schuster S, Puntervoll P, Ziegler M. | Model of tryptophan metabolism, readily scalable using tissue-specific gene expression data. | J Biol Chem. | 288(48) | 34555-66 | 4.573 | |
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| Baumgart M, Groth M, Priebe S, Appelt J, Guthke R, Platzer M, Cellerino A. | Age-dependent regulation of tumor-related microRNAs in the brain of the annual fish Nothobranchius furzeri. | Mech Ageing Dev. | 133(5) | 226-33 | 3.397 | |
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| Beisswanger E, Hahn U. | Towards valid and reusable reference alignments - Ten basic quality checks for ontology alignments and their application to three different reference data sets. | J Biomed Semantics. | 3 Suppl 1 | S4 | 2.262 | |
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| Buyko E, Beisswanger E, Hahn U. | The extraction of pharmacogenetic and pharmacogenomic relations – A case study using PharmGKB | Pac Symp Biocomput. | 367-87 | |
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| Fuellen G, Dengjel J, Hoeflich A, Hoeijmakers J, Kestler HA, Kowald A, Priebe S, Rebholz-Schuhmann D, Schmeck B, Schmitz U, Stolzing A, Sühnel J, Wuttke D, Vera J. | Systems biology and bioinformatics in ageing research: A workshop report | Rejuvenation Res. | 15(6) | 631-41 | 3.311 | |
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| Gaser C, Schmidt S, Metzler M, Herrmann KH, Krumbein I, Reichenbach JR, Witte OW. | Deformation-based brain morphometry in rats. | Neuroimage. | 63(1) | 47-53 | 6.357 | |
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| Gebauer J, Schuster S, de Figueiredo L, Kaleta C. | Detecting and investigating substrate cycles in a genome-scale human metabolic network. | FEBS J. | 279(17) | 3192-202 | 4.001 | |
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| Gossmann TI, Ziegler M, Puntervoll P, de Figueiredo LF, Schuster S, Heiland I. | NAD(+) biosynthesis and salvage - a phylogenetic perspective. | FEBS J. | 279(18) | 3355-63 | 4.001 | |
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| Hahn U, Beisswanger E, Buyko E, Faessler E, Traumüller J, Schröder S, Hornbostel K. | Iterative refinement and quality checking of annotation guidelines: How to deal effectively with semantically sloppy named entity types, such as pathological phenomena. | In: LREC 2012 – Proceedings of the 8th International Conference on Language Resources and Evaluation. Istanbul, Turkey, May 21-27, 2012. Paris: European Language Resources Association (ELRA). | 3881-85 | |||||
| Hahn U, Cohen KB, Garten Y, Shah NH. | Mining the pharmacogenomics literature--a survey of the state of the art. | Brief Bioinform. | 13(4) | 460-94 | 9.617 | |
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| Hahn U, Beisswanger E, Buyko E, Faessler E. | Active Learning-based corpus annotation--the PathoJen experience. | AMIA Annu Symp Proc. | 2012 | 301-10 | |
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| Hartmann N, Englert C. | A microinjection protocol for the generation of transgenic killifish (Species: Nothobranchius furzeri). | Dev Dyn. | 241(6) | 1133-41 | 2.376 | |
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| Kaleta C, de Figueiredo LF, Schuster S. | Against the stream: Relevance of gluconeogenesis from fatty acids for natives of the arctic regions. | Int J Circumpolar Health. | 71 | 18436 | 0.701 | |
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| Kirschner J, Weber D, Neuschl C, Franke A, Böttger M, Zielke L, Powalsky E, Groth M, Shagin D, Petzold A, Hartmann N, Englert C, Brockmann GA, Platzer M, Cellerino A, Reichwald K. | Mapping of quantitative trait loci controlling lifespan in the short-lived fish Nothobranchius furzeri--a new vertebrate model for age research. | Aging Cell. | 11(2) | 252-61 | 6.340 | |
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| Klement K, Melle C, Murzik U, Diekmann S, Norgauer J, Hemmerich P. | Accumulation of annexin A5 at the nuclear envelope is a biomarker of cellular aging. | Mech Ageing Dev. | 133(7) | 508-22 | 3.397 | |
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| Schäuble S, Klement K, Marthandan S, Münch S, Heiland I, Schuster S, Hemmerich P, Diekmann S. | Quantitative model of cell cycle arrest and cellular senescence in primary human fibroblasts. | PLoS One | 7(8) | e42150 | 3.234 | |
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| Schmidt S, Bruehl C, Frahm C, Redecker C, Witte OW. | Age dependence of excitatory-inhibitory balance following stroke. | Neurobiol Aging. | 33(7) | 1356-63 | 5.013 | |
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| Tozzini E, Baumgart M, Battistoni G, Cellerino A. | Adult neurogenesis in the short-lived teleost Nothobranchius furzeri: Localization of neurogenic niches, molecular characterization and effects of aging. | Aging Cell. | 11(2) | 241-51 | 6.593 | |
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| Zarse K, Schmeisser S, Groth M, Priebe S, Beuster G, Kuhlow D, Guthke R, Platzer M, Kahn CR, Ristow M. | Impaired insulin/IGF1 signaling extends life span by promoting mitochondrial L-proline catabolism to induce a transient ROS signal. | Cell Metab. | 15(4) | 451-465 | 17.565 | |
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| Antonow-Schlorke I, Schwab M, Cox LA, Li C, Stuchlik K, Witte OW, Nathanielsz PW, McDonald TJ. | Vulnerability of the fetal primate brain to moderate reduction in maternal global nutrient availability. | Proc Natl Acad Sci U S A. | 108(7) | 3011-6 | 9.674 | |
San Antonio Express News on the paper ( ) |
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| Beisswanger E, Hahn U. | “Of Mice and Men” revisited – Basic quality checks for reference alignments applied to the human-mouse anatomy alignment. | In: Bio-Ontologies 2011– Proceedings of the 11th Bio-Ontologies Workshop @ ISMB 2011. Vienna, Austria, July 15-16, 2011. |
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| Beuster G, Zarse K, Kaleta C, Thierbach R, Kiehntopf M, Steinberg P, Schuster S, Ristow M. | Inhibition of alanine aminotransferase in silico and in vivo promotes mitochondrial metabolism to impair malignant growth. | J Biol Chem. | 286 | 22323-30 | 4.573 | |
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| Buyko E, Hahn U. | Generating semantics for the life sciences via text analytics. | ICSC 2011 – Proceedings of the 5th IEEE International Conference on Semantic Computing. Stanford University, CA, USA, September 19-21, 2011. | 193-6 | |
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| Buyko E, Linde J, Priebe S, Hahn U. | Towards automatic pathway generation from biological full-text publications. | In: Gama J,Bradley E, Hollmen J. (Eds.), Advances in Intelligent Data Analysis X. IDA 2011 – Proceedings of the 10th International Conference on Intelligent Data Analysis. Porto, Portugal, October 29-31, 2011. Springer, (Lecture Notes in Computer Science, 7014). | 7014 | 67-79 | |
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| de Figueiredo LF, Gossmann TI, Ziegler M, Schuster S. | Pathway analysis of NAD+ metabolism. | Biochem J. | 439(2) | 341-8 | 4.396 | |
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| Hartmann N, Reichwald K, Wittig I, Dröse S, Schmeisser S, Lück C, Hahn C, Graf M, Gausmann U, Terzibasi E, Cellerino A, Ristow M, Brandt U, Platzer M, Englert C. | Mitochondrial DNA copy number and function decrease with age in the short-lived fish Nothobranchius furzeri. | Aging Cell. | 10(5) | 824-31 | 6.340 | |
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| Kaleta C, de Figueiredo LF, Werner S, Guthke R, Ristow M, Schuster S. | In silico evidence for gluconeogenesis from fatty acids in humans. | PLoS Comput Biol. | 7(7) | e1002116 | 4.620 | |
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| Priebe S, Linde J, Albrecht D, Guthke R, Brakhage AA. | FungiFun: A web-based application for functional categorization of fungal genes and proteins. | Fungal Genet Biol. | 48(4) | 353-8 | 2.587 | |
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| Ristow M, Schmeisser S. | Extending life span by increasing oxidative stress. | Free Radic Biol Med. | 51(2) | 327-36 | 5.746 | |
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| Schmeisser S, Zarse K, Ristow M. | Lonidamine extends lifespan of adult Caenorhabditis elegans by increasing the formation of mitochondrial reactive oxygen species. | Horm Metab Res. | 43(10) | 687-92 | 2.121 | |
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| Sieber MW, Claus RA, Witte OW, Frahm C. | Attenuated inflammatory response in aged mice brains following stroke. | PLoS One. | 6(10) | e26288 | 3.234 | |
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| Zarse K, Bossecker A, Müller-Kuhrt L, Siems K, Hernandez MA, Berendsohn WG, Birringer M, Ristow M. | The phytochemical glaucarubinone promotes mitochondrial metabolism, reduces body fat, and extends lifespan of Caenorhabditis elegans. | Horm Metab Res. | 43(4) | 241-3 | 2.121 | |
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| Zarse K, Terao T, Tian J, Iwata N, Ishii N, Ristow M. | Low-dose lithium uptake promotes longevity in humans and metazoans. | Eur J Nutr. | 50(5) | 387-9 | 3.467 | |
Spiegel interview with M. Ristow ( ) |
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| Beisswanger E, Wermter J, Hahn U. | Aligning UniProt and MeSH - A case study on human protein terms. | In: MedInfo 2010 – Proceedings of the 13th World Congress on Medical Informatics. Cape Town, South Africa, September 12-15, 2010. IOS Press, pp.1030-4 (Studies in Health Technology and Informatics, 160) | 1030-4 | |
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| Buyko, Hahn U. | Evaluating the impact of alternative dependency graph encodings on solving event extraction tasks. | In: EMNLP 2010 – Proceedings of the 2010 Conference on Empirical Methods in Natural Language Processing. M.I.T., Boston, MA, USA, October 9-11, 2010. Stroudsburg/PA: Association for Computational Liguistics. | 982-992 | |||||
| Fuellen G, Adjaye J, de Grey A, Lepperdinger G, de Magalhães JP, Sühnel J, Wipat A. | Bioinformatics in ageing research: A workshop report. | Rejuvenation Res. | 13(6) | 763-7 | 3.311 | |
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| Hahn U, Tomanek E, Beiswanger E, Faessler E. | A proposal for a configurable silver standard. | In: LAW IV @ ACL 2010 – Proceedings of the 4th Linguistic Annotation Workshop. Uppsala, Sweden, July 15-16, 2010. Stroudsburg/PA: Association for Computational Linguistics. | 235-242 | |||||
| Kuhlow D, Florian S, von Fugura G, Weimer S, Schulz N, Petzke KJ, Zarse K, Pfeiffer AFH, Rudolph KL, Ristow M. | Telomerase deficiency impairs glucose metabolism and insulin secretion. | Aging (Albany NY). | 2(10) | 650-8 | 6.432 | |
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| Schulz TJ, Westermann D, Isken F, Voigt A, Laube B, Thierbach R, Kuhlow D, Zarse K, Schomburg L, Pfeiffer AF, Tschöpe C, Ristow M. | Activation of mitochondrial energy metabolism protects against cardiac failure. | Aging (Albany NY). | 2(11) | 843-53 | 6.432 | |
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| Thierbach R, Drewes G, Fusser M, Voigt A, Kuhlow D, Blume U, Schulz TJ, Reiche C, Glatt H, Epe B, Steinberg P, Ristow M. | The Friedreich‘s ataxia protein frataxin modulates DNA excision repair in prokaryotes and mammals. | Biochem J. | 432(1) | 165-72 | 4.396 | |
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| Zarse K, Schmeisser S, Birringer M, Falk E, Schmoll D, Ristow M. | Differential effects of resveratrol and SRT1720 on lifespan of adult Caenorhabditis elegans. | Horm Metab Res. | 42(12) | 837-9 | 2.121 | |